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KIT proto-oncogene, receptor tyrosine kinase

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Target id: 1805

Nomenclature: KIT proto-oncogene, receptor tyrosine kinase

Abbreviated Name: Kit

Family: Type III RTKs: PDGFR, CSFR, Kit, FLT3 receptor family

Gene and Protein Information Click here for help
Species TM AA Chromosomal Location Gene Symbol Gene Name Reference
Human 1 976 4q12 KIT KIT proto-oncogene, receptor tyrosine kinase
Mouse 1 979 5 39.55 cM Kit KIT proto-oncogene receptor tyrosine kinase
Rat - 978 14p11 Kit KIT proto-oncogene receptor tyrosine kinase
Previous and Unofficial Names Click here for help
CD117 | C-Kit | PBT | stem cell growth factor receptor | piebald trait | c-kit receptor tyrosine kinase | mast/stem cell growth factor receptor | p145 c-kit | Proto-oncogene c-Kit | Steel Factor Receptor | v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog | kit oncogene | KIT proto-oncogene receptor tyrosine kinase
Database Links Click here for help
Alphafold
BRENDA
CATH/Gene3D
ChEMBL Target
DrugBank Target
Ensembl Gene
Entrez Gene
Human Protein Atlas
KEGG Enzyme
KEGG Gene
OMIM
Orphanet
Pharos
RefSeq Nucleotide
RefSeq Protein
SynPHARM
UniProtKB
Wikipedia
Selected 3D Structures Click here for help
Image of receptor 3D structure from RCSB PDB
Description:  Crystal structure of the extracellular domain of the receptor tyrosine kinase, Kit
PDB Id:  2EC8
Resolution:  3.0Å
Species:  Human
References:  70
Image of receptor 3D structure from RCSB PDB
Description:  KIT kinase domain in complex with sunitinib
PDB Id:  3G0E
Ligand:  sunitinib
Resolution:  1.6Å
Species:  Human
References:  18
Enzyme Reaction Click here for help
EC Number: 2.7.10.1
Natural/Endogenous Ligands Click here for help
stem cell factor {Sp: Human}

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Inhibitors
Key to terms and symbols View all chemical structures Click column headers to sort
Ligand Sp. Action Value Parameter Reference
sunitinib Small molecule or natural product Approved drug Primary target of this compound Click here for species-specific activity table Ligand has a PDB structure Hs Inhibition 9.4 pKd 12
pKd 9.4 (Kd 3.7x10-10 M) [12]
AC710 Small molecule or natural product Click here for species-specific activity table Hs Inhibition 9.0 pKd 40
pKd 9.0 (Kd 1x10-9 M) [40]
compound 6li [Chan et al., 2022] Small molecule or natural product Click here for species-specific activity table Hs Inhibition 8.6 pKd 9
pKd 8.6 (Kd 2.6x10-9 M) [9]
quizartinib Small molecule or natural product Approved drug Click here for species-specific activity table Ligand has a PDB structure Hs Inhibition 8.3 pKd 10
pKd 8.3 (Kd 4.8x10-9 M) [10]
masitinib Small molecule or natural product Primary target of this compound Click here for species-specific activity table Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibition 8.1 pKd 12
pKd 8.1 (Kd 8.1x10-9 M) [12]
RG-1530 Small molecule or natural product Click here for species-specific activity table Hs Inhibition 7.6 pKd 59
pKd 7.6 (Kd 2.6x10-8 M) [59]
crenolanib Small molecule or natural product Click here for species-specific activity table Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibition 7.1 pKd 30
pKd 7.1 (Kd 7.8x10-8 M) [30]
BPR1R024 Small molecule or natural product Click here for species-specific activity table Hs Inhibition 9.0 pIC50 38
pIC50 9.0 (IC50 1.1x10-9 M) [38]
famitinib Small molecule or natural product Primary target of this compound Click here for species-specific activity table Hs Inhibition 8.7 pIC50 11
pIC50 8.7 (IC50 2x10-9 M) [11]
dovitinib Small molecule or natural product Click here for species-specific activity table Hs Inhibition 8.5 – 8.7 pIC50 52,60
pIC50 8.5 – 8.7 (IC50 3x10-9 – 2x10-9 M) [52,60]
cediranib Small molecule or natural product Primary target of this compound Click here for species-specific activity table Hs Inhibition 8.5 pIC50 62
pIC50 8.5 (IC50 3x10-9 M) [62]
CHMFL-KIT-64 Small molecule or natural product Click here for species-specific activity table Hs Inhibition 8.4 pIC50 67
pIC50 8.4 (IC50 4x10-9 M) [67]
Description: In a biochemical assay.
ibcasertib Small molecule or natural product Click here for species-specific activity table Hs Inhibition 8.4 pIC50 73
pIC50 8.4 (IC50 4x10-9 M) [73]
Description: Inhibition in a biochemical assay.
elenestinib Small molecule or natural product Click here for species-specific activity table Immunopharmacology Ligand Hs Inhibition >8.4 pIC50 35
pIC50 >8.4 (IC50 <4.5x10-9 M) [35]
Description: Biochemical inhibition assay, using KITD816V
compound 7k [PMID: 23521020] Small molecule or natural product Click here for species-specific activity table Hs Inhibition 8.3 pIC50 20
pIC50 8.3 (IC50 4.89x10-9 M) [20]
JNJ-28312141 Small molecule or natural product Click here for species-specific activity table Hs Inhibition 8.3 pIC50 42
pIC50 8.3 (IC50 5x10-9 M) [42]
sitravatinib Small molecule or natural product Click here for species-specific activity table Hs Inhibition 8.2 pIC50 48
pIC50 8.2 (IC50 6x10-9 M) [48]
Description: In a biochemical enzyme activity assay.
risvodetinib Small molecule or natural product Click here for species-specific activity table Hs Inhibition 8.1 pIC50 64
pIC50 8.1 (IC50 7.8x10-9 M) [64]
henatinib Small molecule or natural product Click here for species-specific activity table Hs Inhibition 8.1 pIC50 11
pIC50 8.1 (IC50 8x10-9 M) [11]
SU11652 Small molecule or natural product Primary target of this compound Click here for species-specific activity table Ligand has a PDB structure Hs Inhibition 8.0 pIC50 16
pIC50 8.0 (IC50 1x10-8 M) [16]
KBP-7018 Small molecule or natural product Click here for species-specific activity table Immunopharmacology Ligand Hs Inhibition 8.0 pIC50 31
pIC50 8.0 (IC50 1x10-8 M) [31]
compound 8h [PMID: 22765894] Small molecule or natural product Click here for species-specific activity table Hs Inhibition 8.0 pIC50 36
pIC50 8.0 (IC50 1.1x10-8 M) [36]
sunitinib Small molecule or natural product Approved drug Primary target of this compound Click here for species-specific activity table Ligand has a PDB structure Hs Inhibition 7.9 pIC50 34
pIC50 7.9 (IC50 1.31x10-8 M) [34]
compound 8i [PMID: 22765894] Small molecule or natural product Click here for species-specific activity table Hs Inhibition 7.9 pIC50 69
pIC50 7.9 (IC50 1.38x10-8 M) [69]
linifanib Small molecule or natural product Click here for species-specific activity table Hs Inhibition 7.8 pIC50 3
pIC50 7.8 (IC50 1.4x10-8 M) [3]
SU-14813 Small molecule or natural product Primary target of this compound Click here for species-specific activity table Hs Inhibition 7.8 pIC50 49
pIC50 7.8 (IC50 1.5x10-8 M) [49]
edicotinib Small molecule or natural product Click here for species-specific activity table Immunopharmacology Ligand Hs Inhibition 7.7 pIC50 24
pIC50 7.7 (IC50 2x10-8 M) [24]
ilorasertib Small molecule or natural product Click here for species-specific activity table Hs Inhibition 7.7 pIC50 25
pIC50 7.7 (IC50 2x10-8 M) [25]
Description: Measuring inhibition of kinase activity in a biochemical assay.
labuxtinib Small molecule or natural product Immunopharmacology Ligand Hs Inhibition 7.7 pIC50 68
pIC50 7.7 (IC50 2x10-8 M) [68]
pexidartinib Small molecule or natural product Approved drug Primary target of this compound Click here for species-specific activity table Ligand has a PDB structure Hs Inhibition >7.6 pIC50 56
pIC50 >7.6 (IC50 <2.7x10-8 M) [56]
bezuclastinib Small molecule or natural product Ligand has a PDB structure Hs Inhibition 7.6 pIC50 23
pIC50 7.6 (IC50 2.8x10-8 M) [23]
Description: Inhibition of KITV560G/D816V
AKN-028 Small molecule or natural product Primary target of this compound Click here for species-specific activity table Hs Inhibition 7.5 pIC50 14
pIC50 7.5 (IC50 2.9x10-8 M) [14]
Description: Inhibition of KIT autophosphorylation in human AML M07 cells which overexpress KIT
CHMFL-KIT-8140 Small molecule or natural product Hs Inhibition 7.5 pIC50 39
pIC50 7.5 (IC50 3.3x10-8 M) [39]
M4205 Small molecule or natural product Click here for species-specific activity table Ligand has a PDB structure Hs Inhibition 7.4 pIC50 7
pIC50 7.4 (IC50 4.4x10-8 M) [7]
compound 19a [PMID: 30503936] Small molecule or natural product Click here for species-specific activity table Hs Inhibition 7.2 pIC50 51
pIC50 7.2 (IC50 6.4x10-8 M) [51]
sorafenib Small molecule or natural product Approved drug Primary target of this compound Click here for species-specific activity table Ligand has a PDB structure Hs Inhibition 7.2 pIC50 65,69
pIC50 7.2 (IC50 6.8x10-8 M) [69]
pIC50 7.2 (IC50 6.8x10-8 M) [65]
avapritinib Small molecule or natural product Approved drug Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibition 7.1 pIC50 15
pIC50 7.1 (IC50 7.3x10-8 M) [15]
PLX5622 Small molecule or natural product Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibition <7.0 pIC50 71
pIC50 <7.0 (IC50 >1x10-7 M) [71]
Description: Binned IC50 value from patent data
OSI-930 Small molecule or natural product Click here for species-specific activity table Hs Inhibition 6.4 – 7.6 pIC50 22
pIC50 6.4 – 7.6 (IC50 4x10-7 – 2.5x10-8 M) [22]
Description: The IC50 varied dependent on whether KIT was activated or unactivated, with the lower value measured for the activated enzyme.
enrupatinib Small molecule or natural product Click here for species-specific activity table Hs Inhibition >7.0 pIC50 50
pIC50 >7.0 (IC50 <1x10-7 M) [50]
Description: Binned value from patent
pazopanib Small molecule or natural product Approved drug Click here for species-specific activity table Hs Inhibition 6.8 pIC50 29
pIC50 6.8 (IC50 1.4x10-7 M) [29]
tandutinib Small molecule or natural product Click here for species-specific activity table Hs Inhibition 6.8 pIC50 33
pIC50 6.8 (IC50 1.7x10-7 M) [33]
masitinib Small molecule or natural product Primary target of this compound Click here for species-specific activity table Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibition 6.7 pIC50 13
pIC50 6.7 (IC50 2x10-7 M) [13]
CP-673451 Small molecule or natural product Click here for species-specific activity table Ligand has a PDB structure Hs Inhibition 6.6 pIC50 53
pIC50 6.6 (IC50 2.52x10-7 M) [53]
GTP-14564 Small molecule or natural product Primary target of this compound Click here for species-specific activity table Hs Inhibition 6.5 pIC50 44
pIC50 6.5 (IC50 3x10-7 M) [44]
vimseltinib Small molecule or natural product Click here for species-specific activity table Ligand has a PDB structure Hs Inhibition 6.0 – 7.0 pIC50 1
pIC50 6.0 – 7.0 (IC50 1x10-6 – 1x10-7 M) [1]
semaxanib Small molecule or natural product Click here for species-specific activity table Ligand has a PDB structure Hs Inhibition 6.4 pIC50 8
pIC50 6.4 (IC50 4x10-7 M) [8]
rivoceranib Small molecule or natural product Approved drug Click here for species-specific activity table Hs Inhibition 6.4 pIC50 58
pIC50 6.4 (IC50 4.29x10-7 M) [58]
Description: Assay used apatinib mesylate (YN968D1)
Ki-20227 Small molecule or natural product Click here for species-specific activity table Hs Inhibition 6.3 pIC50 45
pIC50 6.3 (IC50 4.51x10-7 M) [45]
AST-487 Small molecule or natural product Click here for species-specific activity table Hs Inhibition 6.3 pIC50 2
pIC50 6.3 (IC50 5x10-7 M) [2]
Description: In vitro inhibition of c-Kit
lucitanib Small molecule or natural product Click here for species-specific activity table Ligand has a PDB structure Hs Inhibition 6.3 pIC50 72
pIC50 6.3 (IC50 5.27x10-7 M) [72]
flumbatinib Small molecule or natural product Approved drug Click here for species-specific activity table Hs Inhibition 6.2 pIC50 41
pIC50 6.2 (IC50 6.66x10-7 M) [41]
sotuletinib Small molecule or natural product Click here for species-specific activity table Immunopharmacology Ligand Hs Inhibition 5.4 pIC50 55
pIC50 5.4 (IC50 3.88x10-6 M) [55]
ripretinib Small molecule or natural product Approved drug Hs Inhibition - - 17
[17]
Inhibitor Comments
Note that the primary target of avapritinib (BLU-285) is mutant, constitutively active KIT rather than the wild type kinase [15].
Agonists
Key to terms and symbols Click column headers to sort
Ligand Sp. Action Value Parameter Reference
stem cell factor {Sp: Human} Peptide Ligand is endogenous in the given species Immunopharmacology Ligand Hs Agonist 9.6 – 9.8 pKd 61
pKd 9.6 – 9.8 (Kd 2.4x10-10 – 1.5x10-10 M) [61]
Description: Binding affinity of KIT receptors on cell membranes from OCIM1, MO7e and HEL cells, using 125I-SCF as radioligand.
Antibodies
Key to terms and symbols Click column headers to sort
Antibody Sp. Action Value Parameter Reference
barzolvolimab Peptide Hs Binding - - 28
[28]
briquilimab Peptide Immunopharmacology Ligand Hs Binding - - 63
[63]
DiscoveRx KINOMEscan® screen Click here for help
A screen of 72 inhibitors against 456 human kinases. Quantitative data were derived using DiscoveRx KINOMEscan® platform.
http://www.discoverx.com/services/drug-discovery-development-services/kinase-profiling/kinomescan
Reference: 12,66

Key to terms and symbols Click column headers to sort
Target used in screen: KIT
Ligand Sp. Type Action Value Parameter
sunitinib Small molecule or natural product Approved drug Ligand has a PDB structure Hs Inhibitor Inhibition 9.4 pKd
cediranib Small molecule or natural product Hs Inhibitor Inhibition 9.4 pKd
SU-14813 Small molecule or natural product Hs Inhibitor Inhibition 9.2 pKd
Ki-20227 Small molecule or natural product Hs Inhibitor Inhibition 9.2 pKd
dasatinib Small molecule or natural product Approved drug Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 9.1 pKd
PD-173955 Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 8.7 pKd
linifanib Small molecule or natural product Hs Inhibitor Inhibition 8.7 pKd
foretinib Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 8.6 pKd
tandutinib Small molecule or natural product Hs Inhibitor Inhibition 8.6 pKd
pazopanib Small molecule or natural product Approved drug Hs Inhibitor Inhibition 8.6 pKd
Target used in screen: KIT(A829P)
Ligand Sp. Type Action Value Parameter
staurosporine Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 9.2 pKd
dasatinib Small molecule or natural product Approved drug Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 9.2 pKd
foretinib Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 8.5 pKd
tamatinib Small molecule or natural product Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 8.5 pKd
quizartinib Small molecule or natural product Approved drug Ligand has a PDB structure Hs Inhibitor Inhibition 8.4 pKd
AST-487 Small molecule or natural product Hs Inhibitor Inhibition 8.4 pKd
masitinib Small molecule or natural product Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 7.9 pKd
motesanib Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 7.8 pKd
imatinib Small molecule or natural product Approved drug Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 7.8 pKd
linifanib Small molecule or natural product Hs Inhibitor Inhibition 7.8 pKd
Target used in screen: KIT(D816H)
Ligand Sp. Type Action Value Parameter
staurosporine Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 9.4 pKd
dasatinib Small molecule or natural product Approved drug Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 8.8 pKd
tamatinib Small molecule or natural product Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 8.2 pKd
lestaurtinib Small molecule or natural product Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 8.0 pKd
midostaurin Small molecule or natural product Approved drug Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 7.8 pKd
foretinib Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 7.4 pKd
JNJ-28312141 Small molecule or natural product Hs Inhibitor Inhibition 7.3 pKd
AST-487 Small molecule or natural product Hs Inhibitor Inhibition 7.2 pKd
sunitinib Small molecule or natural product Approved drug Ligand has a PDB structure Hs Inhibitor Inhibition 7.0 pKd
tandutinib Small molecule or natural product Hs Inhibitor Inhibition 6.9 pKd
Target used in screen: KIT(D816V)
Ligand Sp. Type Action Value Parameter
staurosporine Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 9.2 pKd
tamatinib Small molecule or natural product Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 8.6 pKd
dasatinib Small molecule or natural product Approved drug Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 8.6 pKd
lestaurtinib Small molecule or natural product Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 8.1 pKd
midostaurin Small molecule or natural product Approved drug Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 8.1 pKd
foretinib Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 8.0 pKd
JNJ-28312141 Small molecule or natural product Hs Inhibitor Inhibition 7.7 pKd
NVP-TAE684 Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 7.6 pKd
tandutinib Small molecule or natural product Hs Inhibitor Inhibition 7.5 pKd
PD-173955 Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 7.5 pKd
Target used in screen: KIT(L576P)
Ligand Sp. Type Action Value Parameter
SU-14813 Small molecule or natural product Hs Inhibitor Inhibition 9.5 pKd
cediranib Small molecule or natural product Hs Inhibitor Inhibition 9.3 pKd
dasatinib Small molecule or natural product Approved drug Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 9.2 pKd
Ki-20227 Small molecule or natural product Hs Inhibitor Inhibition 9.1 pKd
sunitinib Small molecule or natural product Approved drug Ligand has a PDB structure Hs Inhibitor Inhibition 8.9 pKd
motesanib Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 8.9 pKd
dovitinib Small molecule or natural product Hs Inhibitor Inhibition 8.8 pKd
axitinib Small molecule or natural product Approved drug Ligand has a PDB structure Hs Inhibitor Inhibition 8.8 pKd
pazopanib Small molecule or natural product Approved drug Hs Inhibitor Inhibition 8.7 pKd
linifanib Small molecule or natural product Hs Inhibitor Inhibition 8.7 pKd
Target used in screen: KIT(V559D)
Ligand Sp. Type Action Value Parameter
cediranib Small molecule or natural product Hs Inhibitor Inhibition 9.6 pKd
sunitinib Small molecule or natural product Approved drug Ligand has a PDB structure Hs Inhibitor Inhibition 9.4 pKd
Ki-20227 Small molecule or natural product Hs Inhibitor Inhibition 9.3 pKd
axitinib Small molecule or natural product Approved drug Ligand has a PDB structure Hs Inhibitor Inhibition 9.3 pKd
SU-14813 Small molecule or natural product Hs Inhibitor Inhibition 9.3 pKd
dasatinib Small molecule or natural product Approved drug Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 9.2 pKd
PD-173955 Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 8.8 pKd
linifanib Small molecule or natural product Hs Inhibitor Inhibition 8.8 pKd
foretinib Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 8.7 pKd
pazopanib Small molecule or natural product Approved drug Hs Inhibitor Inhibition 8.6 pKd
Target used in screen: KIT(V559D,T670I)
Ligand Sp. Type Action Value Parameter
sunitinib Small molecule or natural product Approved drug Ligand has a PDB structure Hs Inhibitor Inhibition 9.6 pKd
cediranib Small molecule or natural product Hs Inhibitor Inhibition 9.5 pKd
SU-14813 Small molecule or natural product Hs Inhibitor Inhibition 9.3 pKd
axitinib Small molecule or natural product Approved drug Ligand has a PDB structure Hs Inhibitor Inhibition 8.9 pKd
foretinib Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 8.6 pKd
linifanib Small molecule or natural product Hs Inhibitor Inhibition 8.4 pKd
quizartinib Small molecule or natural product Approved drug Ligand has a PDB structure Hs Inhibitor Inhibition 8.2 pKd
pazopanib Small molecule or natural product Approved drug Hs Inhibitor Inhibition 8.2 pKd
barasertib-hQPA Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 8.1 pKd
staurosporine Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 8.0 pKd
Target used in screen: KIT(V559D,V654A)
Ligand Sp. Type Action Value Parameter
sunitinib Small molecule or natural product Approved drug Ligand has a PDB structure Hs Inhibitor Inhibition 9.7 pKd
SU-14813 Small molecule or natural product Hs Inhibitor Inhibition 9.6 pKd
cediranib Small molecule or natural product Hs Inhibitor Inhibition 9.5 pKd
dasatinib Small molecule or natural product Approved drug Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 8.6 pKd
dovitinib Small molecule or natural product Hs Inhibitor Inhibition 8.5 pKd
Ki-20227 Small molecule or natural product Hs Inhibitor Inhibition 8.5 pKd
axitinib