luminamicin

From August 18th 2026, GtoPdb will require users to register to use the website. Please see our blog post for more information.

Home
Ligands
luminamicin

GtoPdb Ligand ID: 11053

Synonyms: coloradocin | LS-90907

Compound class: Natural product

Comment: Luminamicin is an antibacterial that was isolated from actinomycete strain OMR-59 [2]. It exhibits antibacterial activity against anaerobic bacteria, especially against Clostridium sp. [2] [3]. The chemical stuctures of luminamicin and coloradocin (from an Actinoplanes organism) are identical [3].

2D Structure

Physico-chemical Properties

Hydrogen bond acceptors	12
Hydrogen bond donors	2
Rotatable bonds	1
Topological polar surface area	164.12
Molecular weight	614.24
XLogP	-0.01
No. Lipinski's rules broken	1

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)

SMILES / InChI / InChIKey

Canonical SMILES	COC1C[C@H]2C=C[C@@H]3[C@@H]4[C@]2(O[C@H](C3)[C@@H]([C@H]4O)C)/C(=C/C2[C@H](OC1=O)C(O)CO/C=C/C1=C(CCC(=O)OC2)C(=O)OC1=O)/C
Isomeric SMILES	COC1C[C@H]2C=C[C@@H]3[C@@H]4[C@]2(O[C@H](C3)[C@@H]([C@H]4O)C)/C(=C/C2[C@H](OC1=O)C(O)CO/C=C/C1=C(CCC(=O)OC2)C(=O)OC1=O)/C
InChI	InChI=1S/C32H38O12/c1-15-10-18-13-41-25(34)7-6-20-21(30(37)43-29(20)36)8-9-40-14-22(33)28(18)42-31(38)24(39-3)12-19-5-4-17-11-23-16(2)27(35)26(17)32(15,19)44-23/h4-5,8-10,16-19,22-24,26-28,33,35H,6-7,11-14H2,1-3H3/b9-8+,15-10+/t16-,17-,18?,19+,22?,23+,24?,26-,27+,28-,32-/m0/s1
InChI Key	UGSGHHXIPUAOBJ-FUQUDWCDSA-N

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)