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Unless otherwise stated all data on this page refer to the human proteins. Gene information is provided for human (Hs), mouse (Mm) and rat (Rn).
The mammalian ClC family (reviewed in [2,5-7,15]) contains 9 members that fall, on the basis of sequence homology, into three groups; ClC-1, ClC-2, hClC-Ka (rClC-K1) and hClC-Kb (rClC-K2); ClC-3 to ClC-5, and ClC-6 and -7. ClC-1 and ClC-2 are plasma membrane chloride channels. ClC-Ka and ClC-Kb are also plasma membrane channels (largely expressed in the kidney and inner ear) when associated with barttin (BSND, Q8WZ55), a 320 amino acid 2TM protein [9]. The localisation of the remaining members of the ClC family is likely to be predominantly intracellular in vivo, although they may traffic to the plasma membrane in overexpression systems. Numerous recent reports indicate that ClC-4, ClC-5, ClC-6 and ClC-7 (and by inference ClC-3) function as Cl-/H+ antiporters (secondary active transport), rather than classical Cl- channels [13,17,21,25,30]; reviewed in [2,28]). It has recently been reported that the activity of ClC-5 as a Cl-/H+ exchanger is important for renal endocytosis [22]. Alternative splicing increases the structural diversity within the ClC family. The crystal structure of two bacterial ClC proteins has been described [8] and a eukaryotic ClC transporter (CmCLC) has recently been described at 3.5 Å resolution [11]. Each ClC subunit, with a complex topology of 18 intramembrane segments, contributes a single pore to a dimeric ‘double-barrelled’ ClC channel that contains two independently gated pores, confirming the predictions of previous functional and structural investigations (reviewed in [5,7,15,28]). As found for ClC-4, ClC-5, ClC-6 and ClC-7, the prokaryotic ClC homologue (ClC-ec1) and CmCLC function as H+/Cl antiporters, rather than as ion channels [1,11]. The generation of monomers from dimeric ClC-ec1 has firmly established that each ClC subunit is a functional unit for transport and that cross-subunit interaction is not required for Cl-/H+ exchange in ClC transporters [29].
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1. Accardi A, Miller C. (2004) Secondary active transport mediated by a prokaryotic homologue of ClC Cl- channels. Nature, 427 (6977): 803-7. [PMID:14985752]
2. Accardi A, Picollo A. (2010) CLC channels and transporters: proteins with borderline personalities. Biochim Biophys Acta, 1798 (8): 1457-64. [PMID:20188062]
3. Alekov AK, Fahlke C. (2008) Anion channels: regulation of ClC-3 by an orphan second messenger. Curr Biol, 18 (22): R1061-4. [PMID:19036336]
4. Alekov AK, Fahlke C. (2009) Channel-like slippage modes in the human anion/proton exchanger ClC-4. J Gen Physiol, 133 (5): 485-96. [PMID:19364886]
5. Chen TY. (2005) Structure and function of clc channels. Annu Rev Physiol, 67: 809-39. [PMID:15709979]
6. Duran C, Thompson CH, Xiao Q, Hartzell HC. (2010) Chloride channels: often enigmatic, rarely predictable. Annu Rev Physiol, 72: 95-121. [PMID:19827947]
7. Dutzler R. (2007) A structural perspective on ClC channel and transporter function. FEBS Lett, 581 (15): 2839-44. [PMID:17452037]
8. Dutzler R, Campbell EB, Cadene M, Chait BT, MacKinnon R. (2002) X-ray structure of a ClC chloride channel at 3.0 A reveals the molecular basis of anion selectivity. Nature, 415 (6869): 287-94. [PMID:11796999]
9. Estévez R, Boettger T, Stein V, Birkenhäger R, Otto E, Hildebrandt F, Jentsch TJ. (2001) Barttin is a Cl- channel beta-subunit crucial for renal Cl- reabsorption and inner ear K+ secretion. Nature, 414 (6863): 558-61. [PMID:11734858]
10. Fahlke C, Fischer M. (2010) Physiology and pathophysiology of ClC-K/barttin channels. Front Physiol, 1: 155. [PMID:21423394]
11. Feng L, Campbell EB, Hsiung Y, MacKinnon R. (2010) Structure of a eukaryotic CLC transporter defines an intermediate state in the transport cycle. Science, 330 (6004): 635-41. [PMID:20929736]
12. Fischer M, Janssen AG, Fahlke C. (2010) Barttin activates ClC-K channel function by modulating gating. J Am Soc Nephrol, 21 (8): 1281-9. [PMID:20538786]
13. Graves AR, Curran PK, Smith CL, Mindell JA. (2008) The Cl-/H+ antiporter ClC-7 is the primary chloride permeation pathway in lysosomes. Nature, 453 (7196): 788-92. [PMID:18449189]
14. Guan YY, Wang GL, Zhou JG. (2006) The ClC-3 Cl- channel in cell volume regulation, proliferation and apoptosis in vascular smooth muscle cells. Trends Pharmacol Sci, 27 (6): 290-6. [PMID:16697056]
15. Jentsch TJ. (2008) CLC chloride channels and transporters: from genes to protein structure, pathology and physiology. Crit Rev Biochem Mol Biol, 43 (1): 3-36. [PMID:18307107]
16. Lange PF, Wartosch L, Jentsch TJ, Fuhrmann JC. (2006) ClC-7 requires Ostm1 as a beta-subunit to support bone resorption and lysosomal function. Nature, 440 (7081): 220-3. [PMID:16525474]
17. Leisle L, Ludwig CF, Wagner FA, Jentsch TJ, Stauber T. (2011) ClC-7 is a slowly voltage-gated 2Cl(-)/1H(+)-exchanger and requires Ostm1 for transport activity. EMBO J, 30 (11): 2140-52. [PMID:21527911]
18. Liantonio A, Giannuzzi V, Picollo A, Babini E, Pusch M, Conte Camerino D. (2007) Niflumic acid inhibits chloride conductance of rat skeletal muscle by directly inhibiting the CLC-1 channel and by increasing intracellular calcium. Br J Pharmacol, 150 (2): 235-47. [PMID:17128287]
19. Liantonio A, Picollo A, Carbonara G, Fracchiolla G, Tortorella P, Loiodice F, Laghezza A, Babini E, Zifarelli G, Pusch M et al.. (2008) Molecular switch for CLC-K Cl- channel block/activation: optimal pharmacophoric requirements towards high-affinity ligands. Proc Natl Acad Sci USA, 105 (4): 1369-73. [PMID:18216243]
20. Matsuda JJ, Filali MS, Volk KA, Collins MM, Moreland JG, Lamb FS. (2008) Overexpression of CLC-3 in HEK293T cells yields novel currents that are pH dependent. Am J Physiol, Cell Physiol, 294 (1): C251-62. [PMID:17977943]
21. Neagoe I, Stauber T, Fidzinski P, Bergsdorf EY, Jentsch TJ. (2010) The late endosomal ClC-6 mediates proton/chloride countertransport in heterologous plasma membrane expression. J Biol Chem, 285 (28): 21689-97. [PMID:20466723]
22. Novarino G, Weinert S, Rickheit G, Jentsch TJ. (2010) Endosomal chloride-proton exchange rather than chloride conductance is crucial for renal endocytosis. Science, 328 (5984): 1398-401. [PMID:20430975]
23. Orhan G, Fahlke C, Alekov AK. (2011) Anion- and proton-dependent gating of ClC-4 anion/proton transporter under uncoupling conditions. Biophys J, 100 (5): 1233-41. [PMID:21354396]
24. Osteen JD, Mindell JA. (2008) Insights into the ClC-4 transport mechanism from studies of Zn2+ inhibition. Biophys J, 95 (10): 4668-75. [PMID:18658230]
25. Picollo A, Pusch M. (2005) Chloride/proton antiporter activity of mammalian CLC proteins ClC-4 and ClC-5. Nature, 436 (7049): 420-3. [PMID:16034421]
26. Planells-Cases R, Jentsch TJ. (2009) Chloride channelopathies. Biochim Biophys Acta, 1792 (3): 173-89. [PMID:19708126]
27. Pusch M, Accardi A, Liantonio A, Guida P, Traverso S, Camerino DC, Conti F. (2002) Mechanisms of block of muscle type CLC chloride channels (Review). Mol Membr Biol, 19 (4): 285-92. [PMID:12512775]
28. Pusch M, Zifarelli G, Murgia AR, Picollo A, Babini E. (2006) Channel or transporter? The CLC saga continues. Exp Physiol, 91 (1): 149-52. [PMID:16179405]
29. Robertson JL, Kolmakova-Partensky L, Miller C. (2010) Design, function and structure of a monomeric ClC transporter. Nature, 468 (7325): 844-7. [PMID:21048711]
30. Scheel O, Zdebik AA, Lourdel S, Jentsch TJ. (2005) Voltage-dependent electrogenic chloride/proton exchange by endosomal CLC proteins. Nature, 436 (7049): 424-7. [PMID:16034422]
31. Scholl U, Hebeisen S, Janssen AG, Müller-Newen G, Alekov A, Fahlke C. (2006) Barttin modulates trafficking and function of ClC-K channels. Proc Natl Acad Sci USA, 103 (30): 11411-6. [PMID:16849430]
32. Schulz P, Werner J, Stauber T, Henriksen K, Fendler K. (2010) The G215R mutation in the Cl-/H+-antiporter ClC-7 found in ADO II osteopetrosis does not abolish function but causes a severe trafficking defect. PLoS ONE, 5 (9): e12585. [PMID:20830208]
33. Skov M, Ruijs TQ, Grønnebæk TS, Skals M, Riisager A, Winther JB, Dybdahl KLT, Findsen A, Morgen JJ, Huus N et al.. (2024) The ClC-1 chloride channel inhibitor NMD670 improves skeletal muscle function in rat models and patients with myasthenia gravis. Sci Transl Med, 16 (739): eadk9109. [PMID:38507469]
34. Smith AJ, Lippiat JD. (2010) Voltage-dependent charge movement associated with activation of the CLC-5 2Cl-/1H+ exchanger. FASEB J, 24 (10): 3696-705. [PMID:20501796]
35. Thompson CH, Olivetti PR, Fuller MD, Freeman CS, McMaster D, French RJ, Pohl J, Kubanek J, McCarty NA. (2009) Isolation and characterization of a high affinity peptide inhibitor of ClC-2 chloride channels. J Biol Chem, 284 (38): 26051-62. [PMID:19574231]
36. Wang XQ, Deriy LV, Foss S, Huang P, Lamb FS, Kaetzel MA, Bindokas V, Marks JD, Nelson DJ. (2006) CLC-3 channels modulate excitatory synaptic transmission in hippocampal neurons. Neuron, 52 (2): 321-33. [PMID:17046694]
37. Zdebik AA, Zifarelli G, Bergsdorf EY, Soliani P, Scheel O, Jentsch TJ, Pusch M. (2008) Determinants of anion-proton coupling in mammalian endosomal CLC proteins. J Biol Chem, 283 (7): 4219-27. [PMID:18063579]
38. Zifarelli G, Pusch M. (2009) Conversion of the 2 Cl(-)/1 H+ antiporter ClC-5 in a NO3(-)/H+ antiporter by a single point mutation. EMBO J, 28 (3): 175-82. [PMID:19131966]
Database page citation:
ClC family. Accessed on 04/12/2024. IUPHAR/BPS Guide to PHARMACOLOGY, http://www.guidetopharmacology.org/GRAC/FamilyDisplayForward?familyId=128.
Concise Guide to PHARMACOLOGY citation:
Alexander SPH, Mathie AA, Peters JA, Veale EL, Striessnig J, Kelly E, Armstrong JF, Faccenda E, Harding SD, Davies JA et al. (2023) The Concise Guide to PHARMACOLOGY 2023/24: Ion channels. Br J Pharmacol. 180 Suppl 2:S145-S222.
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ClC channels display the permeability sequence Cl- > Br- > I- (at physiological pH). ClC-1 has significant opening probability at resting membrane potential, accounting for 75% of the membrane conductance at rest in skeletal muscle, and is important for stabilization of the membrane potential. S-(-)CPP, 9-anthroic acid and niflumic acid act intracellularly and exhibit a strongly voltage-dependent block with strong inhibition at negative voltages and relief of block at depolarized potentials ([18] and reviewed in [27]). Inhibition of ClC-2 by the peptide GaTx2, from Leiurus quinquestriatus herbareus venom, is likely to occur through inhibition of channel gating, rather than direct open channel blockade [35]. Although ClC-2 can be activated by cell swelling, it does not correspond to the VRAC channel (see below). Alternative potential physiological functions for ClC-2 are reviewed in [26]. Functional expression of human ClC-Ka and ClC-Kb requires the presence of barttin [9,31] reviewed in [10]. The properties of ClC-Ka/barttin and ClC-Kb/barttin tabulated are those observed in mammalian expression systems: in oocytes the channels display time- and voltage-dependent gating. The rodent homologue (ClC-K1) of ClC-Ka demonstrates limited expression as a homomer, but its function is enhanced by barttin which increases both channel opening probablility in the physiological range of potentials [9,12,31] reviewed in [10]). ClC-Ka is approximately 5 to 6-fold more sensitive to block by 3-phenyl-CPP and DIDS than ClC-Kb, while newly synthesized benzofuran derivatives showed the same blocking affinity (<10 µM) on both CLC-K isoforms [19]. The biophysical and pharmacological properties of ClC-3, and the relationship of the protein to the endogenous volume-regulated anion channel(s) VRAC [3,14] are controversial and further complicated by the possibility that ClC-3 may function as both a Cl-/H+ exchanger and an ion channel [3,25,36]. The functional properties tabulated are those most consistent with the close structural relationship between ClC-3, ClC-4 and ClC-5. Activation of heterologously expressed ClC-3 by cell swelling in response to hypotonic solutions is disputed, as are many other aspects of its regulation. Dependent upon the predominant extracellular anion (e.g. SCN- versus Cl-), CIC-4 can operate in two transport modes: a slippage mode in which behaves as an ion channel and an exchanger mode in which unitary transport rate is 10-fold lower [4]. Similar findings have been made for ClC-5 [37]. ClC-7 associates with a β subunit, Ostm1, which increases the stability of the former [16] and is essential for its function [17].