sarafloxacin   Click here for help

GtoPdb Ligand ID: 10857

Synonyms: A-56620 | A56620
Approved drug
sarafloxacin is an approved drug
Compound class: Synthetic organic
Comment: Sarafloxacin (A-56620) is a quinolone antibacterial [1-3].
2D Structure
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2D Structure

An image of the ligand's 2D structure. For small molecules with SMILES these are drawn using the NCI/CADD Chemical Identifier Resolver. Click on the image to access the chemical structure search tool with the ligand pre-loaded in the structure editor. For other types of ligands, e.g. longer nucleotides and peptides, a manually drawn representation of the molecule may be provided.

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Physico-chemical Properties
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Physico-chemical Properties

Calculated molecular properties are available for small molecules and natural products (not peptides). Properties were generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/). All properties were selected to enable the prediction of the Lipinski Rule-of-Five profile or ‘druglikeness’ for each ligand. For more info on each category see the help pages.

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Hydrogen bond acceptors 4
Hydrogen bond donors 2
Rotatable bonds 3
Topological polar surface area 74.05
Molecular weight 385.12
XLogP 5.02
No. Lipinski's rules broken 1

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)
SMILES / InChI / InChIKey
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SMILES / InChI / InChIKey

SMILES (Simplified Molecular Input Line Entry Specification) A specification for unambiguously describing the structure of chemical molecules using short ASCII strings. Canonical SMILES specify a unique representation of the 2D structure without chiral or isotopic specifications. Isomeric SMILES include chiral specification and isotopes.

Standard InChI (IUPAC International Chemical Identifier) and InChIKey InChI is a non-proprietary, standard, textual identifier for chemical substances designed to facilitate linking of information and database searching. An InChIKey is a simplified version of a full InChI, designed for easier web searching.

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)

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Canonical SMILES Fc1ccc(cc1)n1cc(C(=O)O)c(=O)c2c1cc(N1CCNCC1)c(c2)F
Isomeric SMILES Fc1ccc(cc1)n1cc(C(=O)O)c(=O)c2c1cc(N1CCNCC1)c(c2)F
InChI InChI=1S/C20H17F2N3O3/c21-12-1-3-13(4-2-12)25-11-15(20(27)28)19(26)14-9-16(22)18(10-17(14)25)24-7-5-23-6-8-24/h1-4,9-11,23H,5-8H2,(H,27,28)
InChI Key XBHBWNFJWIASRO-UHFFFAOYSA-N

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)
Classification Click here for help
Compound class Synthetic organic
Approved drug? Yes.
Withdrawn drug? Yes
IUPAC Name Click here for help
6-fluoro-1-(4-fluorophenyl)-4-oxo-7-piperazin-1-ylquinoline-3-carboxylic acid
International Nonproprietary Names Click here for help
INN number INN
6568 sarafloxacin
Synonyms Click here for help
A-56620 | A56620
Database Links Click here for help
Specialist databases
Antibiotic DB Antibiotic DB Database logo Sarafloxacin
Other databases
CAS Registry No. 98105-99-8 (source: WHO INN record)
ChEMBL Ligand CHEMBL37858
GtoPdb PubChem SID 405560298
PubChem CID 56208
Search Google for chemical match using the InChIKey XBHBWNFJWIASRO-UHFFFAOYSA-N
Search Google for chemicals with the same backbone XBHBWNFJWIASRO
Search PubMed clinical trials sarafloxacin
Search PubMed titles sarafloxacin
Search PubMed titles/abstracts sarafloxacin
UniChem Compound Search for chemical match using the InChIKey XBHBWNFJWIASRO-UHFFFAOYSA-N
UniChem Connectivity Search for chemical match using the InChIKey XBHBWNFJWIASRO-UHFFFAOYSA-N