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[3H]LPA   Click here for help

GtoPdb Ligand ID: 5395

Synonyms: [3H]-LPA | [3H]1-oleoyl-LPA | [3H]lysophosphatidic acid
 Ligand is labelled  Ligand is radioactive
Compound class: Metabolite
Comment: This is a radio-labelled version of LPA that can be used as a tracer in receptor binding assays.
2D Structure
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2D Structure

An image of the ligand's 2D structure. For small molecules with SMILES these are drawn using the NCI/CADD Chemical Identifier Resolver. Click on the image to access the chemical structure search tool with the ligand pre-loaded in the structure editor. For other types of ligands, e.g. longer nucleotides and peptides, a manually drawn representation of the molecule may be provided.

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Click here for structure editor
Physico-chemical Properties
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Physico-chemical Properties

Calculated molecular properties are available for small molecules and natural products (not peptides). Properties were generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/). All properties were selected to enable the prediction of the Lipinski Rule-of-Five profile or ‘druglikeness’ for each ligand. For more info on each category see the help pages.

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Hydrogen bond acceptors 7
Hydrogen bond donors 3
Rotatable bonds 21
Topological polar surface area 123.1
Molecular weight 436.26
XLogP 5.9
No. Lipinski's rules broken 2

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)
SMILES / InChI / InChIKey
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SMILES / InChI / InChIKey

SMILES (Simplified Molecular Input Line Entry Specification) A specification for unambiguously describing the structure of chemical molecules using short ASCII strings. Canonical SMILES specify a unique representation of the 2D structure without chiral or isotopic specifications. Isomeric SMILES include chiral specification and isotopes.

Standard InChI (IUPAC International Chemical Identifier) and InChIKey InChI is a non-proprietary, standard, textual identifier for chemical substances designed to facilitate linking of information and database searching. An InChIKey is a simplified version of a full InChI, designed for easier web searching.

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)

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Canonical SMILES CCCCCCCCC=CCCCCCCCC(=O)OCC(COP(=O)(O)O)O
Isomeric SMILES CCCCCCCC/C=C\CCCCCCCC(=O)OCC(COP(=O)(O)O)O
InChI InChI=1S/C21H41O7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-21(23)27-18-20(22)19-28-29(24,25)26/h9-10,20,22H,2-8,11-19H2,1H3,(H2,24,25,26)/b10-9-
InChI Key WRGQSWVCFNIUNZ-KTKRTIGZSA-N

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)
Classification Click here for help
Compound class Metabolite
IUPAC Name Click here for help
{2-hydroxy-3-[(9Z)-octadec-9-enoyloxy]propoxy}phosphonic acid
Synonyms Click here for help
[3H]-LPA | [3H]1-oleoyl-LPA | [3H]lysophosphatidic acid
Database Links Click here for help
Specialist databases
GPCRdb Ligand [3H]LPA
Other databases
GtoPdb PubChem SID 178102052
PubChem CID 5497152
Search Google for chemical match using the InChIKey WRGQSWVCFNIUNZ-KTKRTIGZSA-N
Search Google for chemicals with the same backbone WRGQSWVCFNIUNZ
UniChem Compound Search for chemical match using the InChIKey WRGQSWVCFNIUNZ-KTKRTIGZSA-N
UniChem Connectivity Search for chemical match using the InChIKey WRGQSWVCFNIUNZ-KTKRTIGZSA-N