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ChEMBL ligand: CHEMBL2103837 (FX-1005, FX-1006, FX1006, Tafamidis, Vyndamax, Vyndaqel) |
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DB | Assay description | Assay Type | Standard value | Standard parameter | Original value | Original units | Original parameter | Reference |
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retinol binding protein 4/Plasma retinol-binding protein in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL3100] [GtoPdb: 2549] [UniProtKB: P02753] | ||||||||
ChEMBL | Displacement of [3H]-all trans retinol from human urine biotinylated RBP4 incubated for 16 hrs measured by Scintillation Proximity Assay | B | 4.52 | pIC50 | >30000 | nM | IC50 | J Med Chem (2021) 64: 9010-9041 [PMID:34138572] |
transthyretin/Transthyretin in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL3194] [GtoPdb: 2851] [UniProtKB: P02766] | ||||||||
ChEMBL | Stabilization of wild type human transthyretin expressed in Escherichia coli BL21(DE3) Star assessed as dissociation constant for TTR-amyloid beta (12 to 28) complex formation at 200 uM at 25 degC pre-incubated with transthyretin before amyloid beta (12 to 28) addition by ITC assay (Rvb = 3 +/- 0.2 microM) | B | 5.55 | pKd | 2800 | nM | Kd | J Med Chem (2020) 63: 3205-3214 [PMID:32124607] |
ChEMBL | Stabilization of wild type human transthyretin expressed in Escherichia coli BL21(DE3) Star assessed as dissociation constant for TTR-amyloid beta (1 to 42) complex formation at 200 uM at 25 degC pre-incubated with transthyretin before amyloid beta (1 to 42) addition by ITC assay (Rvb = 0.94 +/- 0.04 microM) | B | 5.98 | pKd | 1050 | nM | Kd | J Med Chem (2020) 63: 3205-3214 [PMID:32124607] |
ChEMBL | Competitive binding affinity to human wild type TTR expressed in Escherichia coli BL-21 assessed as equilibrium dissociation constant of second site in presence of ANS by spectrofluorometer | B | 6.43 | pKd | 370 | nM | Kd | J Med Chem (2017) 60: 7820-7834 [PMID:28920684] |
ChEMBL | Binding affinity to wild type TTR (unknown origin) assessed as Kd2 by isothermal titration calorimetry | B | 6.56 | pKd | 278 | nM | Kd | J Med Chem (2020) 63: 14228-14242 [PMID:32914975] |
ChEMBL | Binding affinity to wild type TTR (unknown origin) assessed as equilibrium dissociation constant of second site by isothermal titration calorimetry | B | 6.56 | pKd | 278 | nM | Kd | J Med Chem (2017) 60: 7820-7834 [PMID:28920684] |
ChEMBL | Binding affinity to recombinant human wild type TTR expressed in Escherichia coli BL21 (DE3) assessed as dissociation constants for second binding site of TTR by isothermal titration calorimetric method | B | 6.56 | pKd | 274 | nM | Kd | Eur J Med Chem (2016) 121: 823-840 [PMID:27020050] |
ChEMBL | Binding affinity to second binding site of wild type TTR (unknown origin) assessed as dissociation constant by ITC assay | B | 6.59 | pKd | 260 | nM | Kd | J Med Chem (2022) 65: 14673-14691 [PMID:36306808] |
ChEMBL | Binding affinity to N-terminal hexa-histidine tagged TTR V30M mutant (unknown origin) expressed in Escherichia coli assessed as dissociation constant at 60 uM by ITC assay | B | 6.59 | pKd | 260 | nM | Kd | J Med Chem (2023) 66: 15511-15523 [PMID:37910439] |
ChEMBL | Binding affinity to TTR V30M mutant (unknown origin) by isothermal titration calorimetry | B | 6.7 | pKd | 200 | nM | Kd | J Med Chem (2021) 64: 14344-14357 [PMID:34547896] |
ChEMBL | Binding affinity to first binding site of wild type TTR (unknown origin) assessed as dissociation constant by ITC assay | B | 8 | pKd | 9.9 | nM | Kd | J Med Chem (2022) 65: 14673-14691 [PMID:36306808] |
ChEMBL | Binding affinity to recombinant human wild type TTR expressed in Escherichia coli BL21 (DE3) assessed as dissociation constants for first binding site of TTR by isothermal titration calorimetric method | B | 8.03 | pKd | 9.3 | nM | Kd | Eur J Med Chem (2016) 121: 823-840 [PMID:27020050] |
ChEMBL | Binding affinity to transthyretin (unknown origin) by ITC method | B | 8.36 | pKd | 4.4 | nM | Kd | J Med Chem (2018) 61: 7862-7876 [PMID:30133284] |
ChEMBL | Binding affinity to wild type TTR (unknown origin) assessed as Kd1 by isothermal titration calorimetry | B | 8.52 | pKd | 3 | nM | Kd | J Med Chem (2020) 63: 14228-14242 [PMID:32914975] |
GtoPdb | - | - | 8.7 | pKd | 2 | nM | Kd | Proc Natl Acad Sci USA (2012) 109: 9629-34 [PMID:22645360] |
ChEMBL | Inhibition of recombinant N-terminal hexa-histidine tagged TTR V30M mutant (unknown origin) expressed in Escherichia coli assessed as acid mediated amyloid-like fibril formation by measuring turbidity incubated for 1 week at 310K in presence of sodium acetate by absorbance based assay | B | 5.51 | pKi | 3100 | nM | Ki | J Med Chem (2023) 66: 15511-15523 [PMID:37910439] |
ChEMBL | Inhibition of urea-induced Transthyretin denaturation in human plasma preincubated for 1 hr followed by urea addition by Western blot analysis | B | 5.03 | pIC50 | 9300 | nM | IC50 | Bioorg Med Chem (2022) 53: 116550-116550 [PMID:34890995] |
ChEMBL | Inhibition of acid mediated TTR V30M mutant aggregation (unknown origin) expressed in Escherichia coli preincubated for 30 mins followed by acetic buffer addition at pH 4.7 and measured after 7 days by thioflavin T based fluorescence analysis | B | 5.26 | pIC50 | 5500 | nM | IC50 | Bioorg Med Chem (2023) 90: 117370-117370 [PMID:37311373] |
ChEMBL | Inhibition of acid-mediated aggregation of TTR V30M mutant (unknown origin) expressed in Escherichia coli pretreated for 30 mins at pH 7 followed by protein dilution in acetate buffer and further incubated for 96 hrs at pH 4.6 by thioflavin-T fluorescence assay | B | 5.28 | pIC50 | 5300 | nM | IC50 | Bioorg Med Chem (2021) 44: 116292-116292 [PMID:34225167] |
ChEMBL | Covalent inhibition of urea-induced Transthyretin denaturation in human plasma preincubated for 1 hr followed by urea addition by Western blot analysis | B | 5.46 | pIC50 | 3490 | nM | IC50 | J Med Chem (2023) 66: 2893-2903 [PMID:36749109] |
ChEMBL | Stabilization of recombinant human wild type TTR expressed in Escherichia coli BL21 (DE3) assessed as inhibition of amyloid beta formation by measuring turbidity preincubated for 30 mins followed by lowering pH from 7.2 to 4.4 measured after 72 hrs by microplate spectrophotometric method | B | 5.51 | pIC50 | 3100 | nM | IC50 | Eur J Med Chem (2016) 121: 823-840 [PMID:27020050] |
ChEMBL | Stabilization of recombinant human wild type TTR expressed in Escherichia coli BL21 (DE3) assessed as inhibition of amyloid beta formation by measuring turbidity preincubated for 30 mins followed by lowering pH from 7.2 to 4.4 measured after 72 hrs by microplate spectrophotometric method | B | 5.51 | pIC50 | 3090.3 | nM | IC50 | Eur J Med Chem (2016) 121: 823-840 [PMID:27020050] |
ChEMBL | Stabilization of TTR V30M mutant (unknown origin) assessed as acid-mediated protein aggregation inhibition ratio incubated for 1 week by absorbance method | B | 5.59 | pIC50 | 2600 | nM | IC50 | J Med Chem (2021) 64: 14344-14357 [PMID:34547896] |
ChEMBL | Inhibition of TTR V30M mutant (unknown origin) assessed as inhibition of acid-mediated amyloidogenesis by measuring fibril formation preincubated with enzyme followed by amyloidogenesis stimulation by adjusting pH to 4.4 measured after 72 hrs relative to control | B | 5.79 | pIC50 | 1620 | nM | IC50 | Eur J Med Chem (2016) 123: 777-787 [PMID:27541261] |
ChEMBL | Inhibition of wild type TTR (unknown origin) assessed as inhibition of acid-mediated amyloidogenesis by measuring fibril formation preincubated with enzyme followed by amyloidogenesis stimulation by adjusting pH to 4.4 measured after 72 hrs relative to control | B | 5.81 | pIC50 | 1550 | nM | IC50 | Eur J Med Chem (2016) 123: 777-787 [PMID:27541261] |
ChEMBL | Binding affinity to human plasma TTR tetramer assessed as displacement of diclofenac-coupled FITC by fluorescence polarization assay | B | 6.39 | pIC50 | 410 | nM | IC50 | J Med Chem (2021) 64: 9010-9041 [PMID:34138572] |
ChEMBL | Inhibition of wild type TTR (unknown origin) | B | 8.57 | pEC50 | 2.7 | nM | EC50 | Eur J Med Chem (2022) 243: 114742-114742 [PMID:36155354] |
ChEMBL | Inhibition of TTR V30M mutant (unknown origin) | B | 8.57 | pEC50 | 2.7 | nM | EC50 | Eur J Med Chem (2022) 243: 114742-114742 [PMID:36155354] |
ChEMBL | Inhibition of TTR V122I mutant (unknown origin) | B | 8.57 | pEC50 | 2.7 | nM | EC50 | Eur J Med Chem (2022) 243: 114742-114742 [PMID:36155354] |
ChEMBL data shown on this page come from version 34:
Zdrazil B, Felix E, Hunter F, Manners EJ, Blackshaw J, Corbett S, de Veij M, Ioannidis H, Lopez DM, Mosquera JF, Magarinos MP, Bosc N, Arcila R, Kizilören T, Gaulton A, Bento AP, Adasme MF, Monecke P, Landrum GA, Leach AR. (2024). The ChEMBL Database in 2023: a drug discovery platform spanning multiple bioactivity data types and time periods. Nucleic Acids Res., 52(D1). DOI: 10.1093/nar/gkad1004. [EPMCID:10767899] [PMID:37933841]
Davies M, Nowotka M, Papadatos G, Dedman N, Gaulton A, Atkinson F, Bellis L, Overington JP. (2015) 'ChEMBL web services: streamlining access to drug discovery data and utilities.' Nucleic Acids Res., 43(W1). DOI: 10.1093/nar/gkv352. [EPMCID:25883136]