navitoclax [Ligand Id: 8319] activity data from GtoPdb and ChEMBL

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ChEMBL ligand: CHEMBL443684 (A-855071.0, ABT-263, Navitoclax)
  • BCL2 apoptosis regulator/Apoptosis regulator Bcl-2 in Human [ChEMBL: CHEMBL4860] [GtoPdb: 2844] [UniProtKB: P10415]
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  • Bcl2-associated agonist of cell death in Human [ChEMBL: CHEMBL3817] [UniProtKB: Q92934]
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  • Bcl-2-like 1/Bcl-2-like protein 1 in Human [ChEMBL: CHEMBL4625] [GtoPdb: 2845] [UniProtKB: Q07817]
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  • Bcl-2-like 2/Bcl-2-like protein 2 in Human [ChEMBL: CHEMBL4677] [GtoPdb: 2846] [UniProtKB: Q92843]
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  • MCL1 apoptosis regulator, BCL2 family member/Induced myeloid leukemia cell differentiation protein Mcl-1 in Human [ChEMBL: CHEMBL4361] [GtoPdb: 2847] [UniProtKB: Q07820]
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DB Assay description Assay Type Standard value Standard parameter Original value Original units Original parameter Reference
BCL2 apoptosis regulator/Apoptosis regulator Bcl-2 in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL4860] [GtoPdb: 2844] [UniProtKB: P10415]
ChEMBL Binding affinity to human full-length N-terminal His6-tagged prephosphorylated Bcl2 (2 to 206 residues) expressed in Escherichia coli S12 extract by isothermal titration calorimetry B 5.74 pKd 1803 nM Kd J Med Chem (2020) 63: 13733-13744 [PMID:33197310]
ChEMBL Binding Assay: Table 1: Binding to Bcl-2 proteins Bcl-2, and Bcl-XL was assessed using the Bcl2scan™ platform: T7 phage strains displaying BCL2 proteins were grown in parallel in 24-well blocks in an E. coli host derived from the BL21 strain. E. coli were grown to log-phase and infected with T7 phage from a frozen stock (multiplicity of infection=0.4) and incubated with shaking at 32° C. until lysis (90-150 minutes). The lysates were centrifuged (5,000×g) and filtered (0.2 μm) to remove cell debris. Streptavidin-coated magnetic beads were treated with biotinylated BIM peptide ligand for 30 minutes at room temperature to generate affinity resins for BCL2 assays. The liganded beads were blocked with excess biotin and washed with blocking buffer (SeaBlock (Pierce), 1% BSA, 0.05% Tween 20, 1 mM DTT) to remove unbound ligand and to reduce non-specific phage binding. Binding reactions were assembled by combining BCL2 proteins, liganded affinity beads, and test compounds in 1× binding buffer (20% SeaBlock, 0.17×PBS, 0.05% Tween 20, 6 mM DTT). Test compounds were prepared as 100× stocks in 100% DMSO. Kds were determined using an 11-point 3-fold compound dilution series with one DMSO control point. All compounds for Kd measurements were distributed by acoustic transfer in 100% DMSO. The compounds were then diluted directly into the assays such that the final concentration of DMSO was 0.9%. All reactions performed in polypropylene 384-well plates. Each was a final volume of 0.02 ml. The assay plates were incubated at room temperature with shaking for 1 hour and the affinity beads were washed with wash buffer (lx PBS, 0.05% Tween 20). The beads were then re-suspended in elution buffer (lx PBS, 0.05% Tween 20, 2 μM non-biotinylated affinity ligand) and incubated at room temperature with shaking for 30 minutes. B 7.26 pKd 55 nM Kd US-11318134-B2. Benzamide compounds (2022)
ChEMBL Binding Assay: Table 1: Binding to Bcl-2 proteins Bcl-2, and Bcl-XL was assessed using the Bcl2scan™ platform: T7 phage strains displaying BCL2 proteins were grown in parallel in 24-well blocks in an E. coli host derived from the BL21 strain. E. coli were grown to log-phase and infected with T7 phage from a frozen stock (multiplicity of infection=0.4) and incubated with shaking at 32° C. until lysis (90-150 minutes). The lysates were centrifuged (5,000×g) and filtered (0.2 μm) to remove cell debris. Streptavidin-coated magnetic beads were treated with biotinylated BIM peptide ligand for 30 minutes at room temperature to generate affinity resins for BCL2 assays. The liganded beads were blocked with excess biotin and washed with blocking buffer (SeaBlock (Pierce), 1% BSA, 0.05% Tween 20, 1 mM DTT) to remove unbound ligand and to reduce non-specific phage binding. Binding reactions were assembled by combining BCL2 proteins, liganded affinity beads, and test compounds in 1× binding buffer (20% SeaBlock, 0.17×PBS, 0.05% Tween 20, 6 mM DTT). Test compounds were prepared as 100× stocks in 100% DMSO. Kds were determined using an 11-point 3-fold compound dilution series with one DMSO control point. All compounds for Kd measurements were distributed by acoustic transfer in 100% DMSO. The compounds were then diluted directly into the assays such that the final concentration of DMSO was 0.9%. All reactions performed in polypropylene 384-well plates. Each was a final volume of 0.02 ml. The assay plates were incubated at room temperature with shaking for 1 hour and the affinity beads were washed with wash buffer (lx PBS, 0.05% Tween 20). B 7.26 pKd 55 nM Kd US-11344546-B2. Benzamide compounds (2022)
ChEMBL Bcl-2 Protein Family Binding Assay: Binding to Bcl-2 proteins Bcl-2, and Bcl-XL was assessed using the Bcl2scan™ platform: T7 phage strains displaying BCL2 proteins were grown in parallel in 24-well blocks in an E. coli host derived from the BL21 strain. E. coliwere grown to log-phase and infected with T7 phage from a frozen stock (multiplicity of infection=0.4) and incubated with shaking at 32° C. until lysis (90-150 minutes). The lysates were centrifuged (5,000×g) and filtered (0.2 μm) to remove cell debris. Streptavidin-coated magnetic beads were treated with biotinylated BIM peptide ligand for 30 minutes at room temperature to generate affinity resins for BCL2 assays. The liganded beads were blocked with excess biotin and washed with blocking buffer (SeaBlock (Pierce), 1% BSA, 0.05% Tween 20, 1 mM DTT) to remove unbound ligand and to reduce non-specific phage binding. Binding reactions were assembled by combining BCL2 proteins, liganded affinity beads, and test compounds in 1× binding buffer (20% SeaBlock, 0.17×PBS, 0.05% Tween 20, 6 mM DTT). Test compounds were prepared as 100× stocks in 100% DMSO. Kds were determined using an 11-point 3-fold compound dilution series with one DMSO control point. All compounds for Kd measurements were distributed by acoustic transfer in 100% DMSO. The compounds were then diluted directly into the assays such that the final concentration of DMSO was 0.9%. All reactions performed in polypropylene 384-well plates. Each was a final volume of 0.02 ml. The assay plates were incubated at room temperature with shaking for 1 hour and the affinity beads were washed with wash buffer (lx PBS, 0.05% Tween 20). The beads were then re-suspended in elution buffer (lx PBS, 0.05% Tween 20, 2 μM non-biotinylated affinity ligand) and incubated at room temperature with shaking for 30 minutes. B 7.26 pKd 55 nM Kd US-11590126-B2. Benzamide compounds (2023)
ChEMBL Binding affinity to human full-length N-terminal His6-tagged Bcl2 (2 to 206 residues) expressed in Escherichia coli S12 extract by isothermal titration calorimetry B 7.69 pKd 20.6 nM Kd J Med Chem (2020) 63: 13733-13744 [PMID:33197310]
ChEMBL Displacement of biotin-tagged MRPEPATIAQELRRIGDEFNA from C-terminal His-tagged human BCL-2 (1` to 211 residues) expressed in Escherichia coli measured after 2 hrs by AlphaScreen assay B 9.19 pKd 0.65 nM Kd J Med Chem (2021) 64: 14230-14246 [PMID:34533954]
GtoPdb - - 9 pKi <1 nM Ki J Med Chem (2008) 51: 6902-15 [PMID:18841882]
ChEMBL Inhibition of Flu-Bax peptide binding to Bcl2 (unknown origin) by time-resolved fluorescence resonance energy transfer assay B 9 pKi <1 nM Ki Eur J Med Chem (2019) 177: 63-75 [PMID:31129454]
ChEMBL Binding affinity to Bcl-2 (unknown origin) assessed as inhibition constant by competitive fluorescence polarization assay B 9 pKi <=1 nM Ki Eur J Med Chem (2020) 201: 112446-112446 [PMID:32563811]
ChEMBL Binding affinity to human recombinant Bcl-2 assessed as inhibition constant by fluorescence polarization assay B 9 pKi <1 nM Ki J Med Chem (2024) 67: 5963-5998 [PMID:38597264]
ChEMBL Inhibition of Bcl-2 (unknown origin) by fluorescence polarization assay B 9 pKi <1 nM Ki Eur J Med Chem (2018) 146: 471-482 [PMID:29407973]
ChEMBL Binding affinity to Bcl-2 (unknown origin) by fluorescence polarization assay B 9 pKi <1 nM Ki Bioorg Med Chem Lett (2016) 26: 2105-2114 [PMID:26988306]
ChEMBL Binding affinity to BCL2 (unknown origin) by fluorescence polarization assay B 9 pKi <1 nM Ki Medchemcomm (2016) 7: 778-787
ChEMBL Displacement of fluorescein labeled Bax peptide from Bcl2 by fluorescence polarization assay B 9 pKi <1 nM Ki J Med Chem (2008) 51: 6902-6915 [PMID:18841882]
ChEMBL Inhibition of BCL2 (unknown origin) by TR-FRET assay B 9.3 pKi <0.5 nM Ki J Med Chem (2020) 63: 11420-11435 [PMID:32539387]
ChEMBL Binding affinity to Bcl-2 (unknown origin) assessed as dissociation constant incubated for 1 hrs by TR-FRET assay B 10.36 pKi 0.04 nM Ki Sci Transl Med (2015) 7: null-null [PMID:25787766]
ChEMBL Inhibition of Bcl2 (unknown origin) B 10.36 pKi 0.04 nM Ki J Med Chem (2018) 61: 2636-2651 [PMID:28926247]
ChEMBL Inhibition of Bcl2 (unknown origin) B 10.36 pKi 0.04 nM Ki J Med Chem (2019) 62: 10005-10025 [PMID:31188592]
ChEMBL Inhibition of BCL-2 (unknown origin) by fluorescence polarization assay B 11 pKi <0.01 nM Ki Eur J Med Chem (2019) 167: 76-95 [PMID:30769242]
ChEMBL Inhibition of human BCL-2 overexpressed in mouse FDC-P1 cells assessed as cell viability after 24 hrs by Cell Titer Glo assay B 7.82 pIC50 <15 nM IC50 Bioorg Med Chem Lett (2014) 24: 3026-3033 [PMID:24881567]
ChEMBL Displacement of Bax-derived peptide from Bcl-2 (unknown origin) by fluorescence polarization assay B 7.99 pIC50 10.3 nM IC50 Bioorg Med Chem (2018) 26: 443-454 [PMID:29229225]
ChEMBL Inhibition of Bcl-2 (unknown origin) by fluorescence polarization assay B 7.99 pIC50 10.3 nM IC50 Eur J Med Chem (2023) 261: 115802-115802 [PMID:37713805]
ChEMBL Homogeneous Time Resolved Fluorescence (HTRF) Assay: Table 2: Binding to Bcl-2 proteins Bcl-2, and Bcl-XL was also assessed using an HTRF assay. Background: FAM-Bak/Bad binds to surface pocket of the Bcl-2 protein family. This binding can be monitored by HTRF signals between anti-GST-Tb and FAM-peptide using GST-tagged Bcl proteins. Assay conditions: Bcl-2: 4 nM Bcl-2, 100 nM FAM-Bak peptide, Bcl-XL: 3 nM Bcl-XL, 40 nM FAM-Bad peptide in 20 mM K Phosphate, pH 7.5, 50 mM NaCl, 1 mM EDTA, 0.005% Triton X-100 and 1% DMSO (final). Assay procedure: Compounds were tested in 10-dose IC50 mode, in singlicate, with 3-fold serial dilution starting at 10 ÎĽM or 1 ÎĽM. Compound stock solutions were added to protein solution using Acoustic technology. The compounds were then incubated with protein for 10 min at room temperature. The respective FAM labeled peptide was added and incubated for another 10 min and then anti-GST-Tb was added. After 60 min at rt, the HTRF fluorescence signal ratio was measured. B 8 pIC50 <10 nM IC50 US-11318134-B2. Benzamide compounds (2022)
ChEMBL Homogeneous Time Resolved Fluorescence (HTRF) Assay: Table 2: Binding to Bcl-2 proteins Bcl-2, and Bcl-XL was also assessed using an HTRF assay. Background: FAM-Bak/Bad binds to surface pocket of the Bcl-2 protein family. This binding can be monitored by HTRF signals between anti-GST-Tb and FAM-peptide using GST-tagged Bcl proteins. Assay conditions: Bcl-2: 4 nM Bcl-2, 100 nM FAM-Bak peptide, Bcl-XL: 3 nM Bcl-XL, 40 nM FAM-Bad peptide in 20 mM K Phosphate, pH 7.5, 50 mM NaCl, 1 mM EDTA, 0.005% Triton X-100 and 1% DMSO (final). Assay procedure: Compounds were tested in 10-dose IC50 mode, in singlicate, with 3-fold serial dilution starting at 10 ÎĽM or 1 ÎĽM. Compound stock solutions were added to protein solution using Acoustic technology. B 8 pIC50 <10 nM IC50 US-11344546-B2. Benzamide compounds (2022)
ChEMBL Inhibition of recombinant human C-terminal 6xHis-tagged Bcl-2 (M1 to F212 residues) expressed in Escherichia coli using HyLite Fluor 647-labeled BIM peptide as substrate incubated for 120 to 180 mins by TR-FRET assay B 8.7 pIC50 2 nM IC50 Bioorg Med Chem Lett (2019) 29: 126682-126682 [PMID:31606346]
Aspartyl/asparaginyl beta-hydroxylase in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL4680030] [UniProtKB: Q12797]
ChEMBL Inhibition of N-His6-tagged human AspH (315-755) expressed in Escherichia coli BL21 (DE3) using 1 uM hFX-CP as substrate mixture with high 200 uM 2OG, 100 uM L-ascorbic acid and 2 uM FAS incubated for 35 mins by MS analysis B 5.88 pIC50 1330 nM IC50 Bioorg Med Chem (2020) 28: 115675-115675 [PMID:33069066]
ChEMBL Inhibition of N-His6-tagged human AspH (315-755) expressed in Escherichia coli BL21 (DE3) using high 10 uM hFX-CP as substrate mixture with 10 uM 2OG, 100 uM L-ascorbic acid and 2 uM FAS incubated for 35 mins by MS analysis B 5.92 pIC50 1210 nM IC50 Bioorg Med Chem (2020) 28: 115675-115675 [PMID:33069066]
ChEMBL Inhibition of N-His6-tagged human AspH (315-755) expressed in Escherichia coli BL21 (DE3) using 1 uM hFX-CP as substrate mixture with 3 uM 2OG, 100 uM L-ascorbic acid and 2 uM FAS incubated for 35 mins by MS analysis B 5.99 pIC50 1030 nM IC50 Bioorg Med Chem (2020) 28: 115675-115675 [PMID:33069066]
ChEMBL Inhibition of N-His6-tagged human AspH (315-755) expressed in Escherichia coli BL21 (DE3) using 1 uM hFX-CP as substrate mixture with 3 uM 2OG, 100 uM L-ascorbic acid and high 20 uM FAS incubated for 35 mins by MS analysis B 6.1 pIC50 800 nM IC50 Bioorg Med Chem (2020) 28: 115675-115675 [PMID:33069066]
Bcl2-associated agonist of cell death in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL3817] [UniProtKB: Q92934]
ChEMBL Binding Assay: Table 1: Binding to Bcl-2 proteins Bcl-2, and Bcl-XL was assessed using the Bcl2scan™ platform: T7 phage strains displaying BCL2 proteins were grown in parallel in 24-well blocks in an E. coli host derived from the BL21 strain. E. coli were grown to log-phase and infected with T7 phage from a frozen stock (multiplicity of infection=0.4) and incubated with shaking at 32° C. until lysis (90-150 minutes). The lysates were centrifuged (5,000×g) and filtered (0.2 μm) to remove cell debris. Streptavidin-coated magnetic beads were treated with biotinylated BIM peptide ligand for 30 minutes at room temperature to generate affinity resins for BCL2 assays. The liganded beads were blocked with excess biotin and washed with blocking buffer (SeaBlock (Pierce), 1% BSA, 0.05% Tween 20, 1 mM DTT) to remove unbound ligand and to reduce non-specific phage binding. Binding reactions were assembled by combining BCL2 proteins, liganded affinity beads, and test compounds in 1× binding buffer (20% SeaBlock, 0.17×PBS, 0.05% Tween 20, 6 mM DTT). Test compounds were prepared as 100× stocks in 100% DMSO. Kds were determined using an 11-point 3-fold compound dilution series with one DMSO control point. All compounds for Kd measurements were distributed by acoustic transfer in 100% DMSO. The compounds were then diluted directly into the assays such that the final concentration of DMSO was 0.9%. All reactions performed in polypropylene 384-well plates. Each was a final volume of 0.02 ml. The assay plates were incubated at room temperature with shaking for 1 hour and the affinity beads were washed with wash buffer (lx PBS, 0.05% Tween 20). B 7.26 pKd 55 nM Kd US-11344546-B2. Benzamide compounds (2022)
ChEMBL Displacement of fluorescein labeled BAD peptide from Bcl-XL by fluorescence polarization assay B 9 pKi <1 nM Ki J Med Chem (2008) 51: 6902-6915 [PMID:18841882]
ChEMBL Binding affinity to BH3 binding groove of BclXL B 9.3 pKi <0.5 nM Ki J Med Chem (2008) 51: 3661-3680 [PMID:18457385]
ChEMBL Homogeneous Time Resolved Fluorescence (HTRF) Assay: Table 2: Binding to Bcl-2 proteins Bcl-2, and Bcl-XL was also assessed using an HTRF assay. Background: FAM-Bak/Bad binds to surface pocket of the Bcl-2 protein family. This binding can be monitored by HTRF signals between anti-GST-Tb and FAM-peptide using GST-tagged Bcl proteins. Assay conditions: Bcl-2: 4 nM Bcl-2, 100 nM FAM-Bak peptide, Bcl-XL: 3 nM Bcl-XL, 40 nM FAM-Bad peptide in 20 mM K Phosphate, pH 7.5, 50 mM NaCl, 1 mM EDTA, 0.005% Triton X-100 and 1% DMSO (final). Assay procedure: Compounds were tested in 10-dose IC50 mode, in singlicate, with 3-fold serial dilution starting at 10 ÎĽM or 1 ÎĽM. Compound stock solutions were added to protein solution using Acoustic technology. B 8 pIC50 <10 nM IC50 US-11344546-B2. Benzamide compounds (2022)
Bcl-2-like 1/Bcl-2-like protein 1 in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL4625] [GtoPdb: 2845] [UniProtKB: Q07817]
ChEMBL Binding Assay: Table 1: Binding to Bcl-2 proteins Bcl-2, and Bcl-XL was assessed using the Bcl2scan™ platform: T7 phage strains displaying BCL2 proteins were grown in parallel in 24-well blocks in an E. coli host derived from the BL21 strain. E. coli were grown to log-phase and infected with T7 phage from a frozen stock (multiplicity of infection=0.4) and incubated with shaking at 32° C. until lysis (90-150 minutes). The lysates were centrifuged (5,000×g) and filtered (0.2 μm) to remove cell debris. Streptavidin-coated magnetic beads were treated with biotinylated BIM peptide ligand for 30 minutes at room temperature to generate affinity resins for BCL2 assays. The liganded beads were blocked with excess biotin and washed with blocking buffer (SeaBlock (Pierce), 1% BSA, 0.05% Tween 20, 1 mM DTT) to remove unbound ligand and to reduce non-specific phage binding. Binding reactions were assembled by combining BCL2 proteins, liganded affinity beads, and test compounds in 1× binding buffer (20% SeaBlock, 0.17×PBS, 0.05% Tween 20, 6 mM DTT). Test compounds were prepared as 100× stocks in 100% DMSO. Kds were determined using an 11-point 3-fold compound dilution series with one DMSO control point. All compounds for Kd measurements were distributed by acoustic transfer in 100% DMSO. The compounds were then diluted directly into the assays such that the final concentration of DMSO was 0.9%. All reactions performed in polypropylene 384-well plates. Each was a final volume of 0.02 ml. The assay plates were incubated at room temperature with shaking for 1 hour and the affinity beads were washed with wash buffer (lx PBS, 0.05% Tween 20). The beads were then re-suspended in elution buffer (lx PBS, 0.05% Tween 20, 2 μM non-biotinylated affinity ligand) and incubated at room temperature with shaking for 30 minutes. B 7.26 pKd 55 nM Kd US-11318134-B2. Benzamide compounds (2022)
ChEMBL Bcl-2 Protein Family Binding Assay: Binding to Bcl-2 proteins Bcl-2, and Bcl-XL was assessed using the Bcl2scan™ platform: T7 phage strains displaying BCL2 proteins were grown in parallel in 24-well blocks in an E. coli host derived from the BL21 strain. E. coliwere grown to log-phase and infected with T7 phage from a frozen stock (multiplicity of infection=0.4) and incubated with shaking at 32° C. until lysis (90-150 minutes). The lysates were centrifuged (5,000×g) and filtered (0.2 μm) to remove cell debris. Streptavidin-coated magnetic beads were treated with biotinylated BIM peptide ligand for 30 minutes at room temperature to generate affinity resins for BCL2 assays. The liganded beads were blocked with excess biotin and washed with blocking buffer (SeaBlock (Pierce), 1% BSA, 0.05% Tween 20, 1 mM DTT) to remove unbound ligand and to reduce non-specific phage binding. Binding reactions were assembled by combining BCL2 proteins, liganded affinity beads, and test compounds in 1× binding buffer (20% SeaBlock, 0.17×PBS, 0.05% Tween 20, 6 mM DTT). Test compounds were prepared as 100× stocks in 100% DMSO. Kds were determined using an 11-point 3-fold compound dilution series with one DMSO control point. All compounds for Kd measurements were distributed by acoustic transfer in 100% DMSO. The compounds were then diluted directly into the assays such that the final concentration of DMSO was 0.9%. All reactions performed in polypropylene 384-well plates. Each was a final volume of 0.02 ml. The assay plates were incubated at room temperature with shaking for 1 hour and the affinity beads were washed with wash buffer (lx PBS, 0.05% Tween 20). The beads were then re-suspended in elution buffer (lx PBS, 0.05% Tween 20, 2 μM non-biotinylated affinity ligand) and incubated at room temperature with shaking for 30 minutes. B 7.26 pKd 55 nM Kd US-11590126-B2. Benzamide compounds (2023)
ChEMBL Displacement of biotin-tagged LWAAQRYGRELRRMSDEFEGSFKGL from human BCL-XL expressed in Escherichia coli measured after 2 hrs by AlphaScreen assay B 8.68 pKd 2.07 nM Kd J Med Chem (2021) 64: 14230-14246 [PMID:34533954]
ChEMBL Inhibition of BCL-XL (unknown origin) by fluorescence polarization assay B 7.32 pKi 48 nM Ki Eur J Med Chem (2019) 167: 76-95 [PMID:30769242]
ChEMBL Binding affinity to Bcl-xl B 7.44 pKi 36 nM Ki J Med Chem (2010) 53: 6779-6810 [PMID:20925433]
GtoPdb - - 9 pKi <1 nM Ki J Med Chem (2008) 51: 6902-15 [PMID:18841882]
ChEMBL Inhibition of Bcl-xL (unknown origin) by fluorescence polarization assay B 9 pKi <1 nM Ki Eur J Med Chem (2018) 146: 471-482 [PMID:29407973]
ChEMBL Binding affinity to Bcl-xL by competitive fluorescence polarization assay B 9 pKi <1 nM Ki J Med Chem (2010) 53: 2577-2588 [PMID:20192224]
ChEMBL Binding affinity to Bcl-XL (unknown origin) by fluorescence polarization assay B 9 pKi <1 nM Ki Bioorg Med Chem Lett (2016) 26: 2105-2114 [PMID:26988306]
ChEMBL Binding affinity to His-tagged Bcl-xL (unknown origin) assessed as inhibition constant by competitive fluorescence polarization assay B 9 pKi <=1 nM Ki Eur J Med Chem (2020) 201: 112446-112446 [PMID:32563811]
ChEMBL Binding affinity to Bcl-xL (unknown origin) assessed as inhibition constant B 9 pKi <1 nM Ki J Med Chem (2024) 67: 5963-5998 [PMID:38597264]
ChEMBL Inhibition of Flu-Bax peptide binding to Bcl-xL (unknown origin) by time-resolved fluorescence resonance energy transfer assay B 9.3 pKi <0.5 nM Ki Eur J Med Chem (2019) 177: 63-75 [PMID:31129454]
ChEMBL Binding affinity to Bcl-XL (unknown origin) by fluorescence polarization assay B 9.3 pKi <0.5 nM Ki Medchemcomm (2016) 7: 778-787
ChEMBL Inhibition of F-Bak binding to GST-tagged BCL-XL (unknown origin) measured after 1 hr by TR-FRET assay B 10 pKi <0.1 nM Ki ACS Med Chem Lett (2021) 12: 1011-1016 [PMID:34141086]
ChEMBL Binding affinity to Bcl-xl (unknown origin) assessed as dissociation constant incubated for 1 hrs by TR-FRET assay B 10.26 pKi 0.06 nM Ki Sci Transl Med (2015) 7: null-null [PMID:25787766]
ChEMBL Inhibition of Bcl-xL (unknown origin) B 10.26 pKi 0.06 nM Ki J Med Chem (2018) 61: 2636-2651 [PMID:28926247]
ChEMBL Inhibition of human BCL-xL overexpressed in mouse FDC-P1 cells assessed as cell viability after 24 hrs by Cell Titer Glo assay B 7.22 pIC50 60 nM IC50 Bioorg Med Chem Lett (2014) 24: 3026-3033 [PMID:24881567]
ChEMBL Homogeneous Time Resolved Fluorescence (HTRF) Assay: Table 2: Binding to Bcl-2 proteins Bcl-2, and Bcl-XL was also assessed using an HTRF assay. Background: FAM-Bak/Bad binds to surface pocket of the Bcl-2 protein family. This binding can be monitored by HTRF signals between anti-GST-Tb and FAM-peptide using GST-tagged Bcl proteins. Assay conditions: Bcl-2: 4 nM Bcl-2, 100 nM FAM-Bak peptide, Bcl-XL: 3 nM Bcl-XL, 40 nM FAM-Bad peptide in 20 mM K Phosphate, pH 7.5, 50 mM NaCl, 1 mM EDTA, 0.005% Triton X-100 and 1% DMSO (final). Assay procedure: Compounds were tested in 10-dose IC50 mode, in singlicate, with 3-fold serial dilution starting at 10 ÎĽM or 1 ÎĽM. Compound stock solutions were added to protein solution using Acoustic technology. The compounds were then incubated with protein for 10 min at room temperature. The respective FAM labeled peptide was added and incubated for another 10 min and then anti-GST-Tb was added. After 60 min at rt, the HTRF fluorescence signal ratio was measured. B 8 pIC50 <10 nM IC50 US-11318134-B2. Benzamide compounds (2022)
ChEMBL Inhibition of recombinant human N-terminal GST-tagged Bcl-xl (1 to 209 residues) expressed in Escherichia coli using HyLite Fluor 647-labeled BIM peptide as substrate incubated for 120 to 180 mins by TR-FRET assay B 8.1 pIC50 <8 nM IC50 Bioorg Med Chem Lett (2019) 29: 126682-126682 [PMID:31606346]
ChEMBL Displacement of FITC-Bid from GST-tagged human Bcl-xL expressed in Escherichia coli after 2 hrs by TR-FRET assay B 8.48 pIC50 3.3 nM IC50 J Med Chem (2013) 56: 9635-9645 [PMID:24215352]
Bcl-2-like 2/Bcl-2-like protein 2 in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL4677] [GtoPdb: 2846] [UniProtKB: Q92843]
ChEMBL Inhibition of BCL-W (unknown origin) by fluorescence polarization assay B 6.61 pKi 245 nM Ki Eur J Med Chem (2019) 167: 76-95 [PMID:30769242]
ChEMBL Binding affinity to BCL-W (unknown origin) assessed as dissociation constant incubated for 1 hrs by TR-FRET assay B 7.68 pKi 21 nM Ki Sci Transl Med (2015) 7: null-null [PMID:25787766]
ChEMBL Binding affinity to Bcl-w (unknown origin) assessed as inhibition constant by competitive fluorescence polarization assay B 9 pKi <=1 nM Ki Eur J Med Chem (2020) 201: 112446-112446 [PMID:32563811]
ChEMBL Inhibition of recombinant human N-terminal 6xHis-tagged Bcl-w (M1 to R171) expressed in Escherichia coli using HyLite Fluor 647-labeled Bim peptide as substrate incubated for 120 to 180 mins by TR-FRET assay B 7.15 pIC50 70 nM IC50 Bioorg Med Chem Lett (2019) 29: 126682-126682 [PMID:31606346]
CYP2C9/Cytochrome P450 2C9 in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL3397] [GtoPdb: 1326] [UniProtKB: P11712]
ChEMBL CYP 2C9 inhibition: The five isoform-selective probe substrate (in a cocktail manner) was used as a measure of activity for the individual cytochrome P450 (CYPs) in a pool of human liver microsomes, i.e., phenacetin for CYP1A2, diclofenac for CYP2C9, S-Mephenyloin for CYP2C19, dextromethorphan for CYP2D6, midazolam for CYP3A. Test compounds, at 7 concentration levels including zero, were incubated in human liver microsomes (HLM) together with the 5 probe substrate (in a cocktail manner). IC50 was determined by monitoring the reduction of the CYP activity as a function of test compound concentration and quantified by product formation using LC-MS/MS. Ketoconazole for CYP3A was included as quality control. All incubations were performed in singlet. B 5.82 pIC50 1500 nM IC50 US-11420968-B2. Bcl-2 inhibitors (2022)
MCL1 apoptosis regulator, BCL2 family member/Induced myeloid leukemia cell differentiation protein Mcl-1 in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL4361] [GtoPdb: 2847] [UniProtKB: Q07820]
ChEMBL Inhibition of Mcl-1 (unknown origin) by fluorescence polarization assay B 6.26 pKi 550 nM Ki Eur J Med Chem (2018) 146: 471-482 [PMID:29407973]
ChEMBL Inhibition of F-Bak binding to GST-tagged MCL1 (unknown origin) measured after 1 hr by TR-FRET assay B 6.65 pKi >224 nM Ki ACS Med Chem Lett (2021) 12: 1011-1016 [PMID:34141086]
ChEMBL Binding affinity to MCL-1 (unknown origin) assessed as dissociation constant incubated for 1 hrs by TR-FRET assay B 6.65 pKi >224 nM Ki Sci Transl Med (2015) 7: null-null [PMID:25787766]
ChEMBL Inhibition of Flu-Bax peptide binding to MCl-1 (unknown origin) by time-resolved fluorescence resonance energy transfer assay B 9 pKi <1 nM Ki Eur J Med Chem (2019) 177: 63-75 [PMID:31129454]
ChEMBL Displacement of FITC-Bid from GST-tagged human Mcl-1 expressed in Escherichia coli after 2 hrs by TR-FRET assay B 4.52 pIC50 >30000 nM IC50 J Med Chem (2013) 56: 9635-9645 [PMID:24215352]
ChEMBL Inhibition of recombinant human C-terminal 6xHis-tagged Mcl-1 (E171 ti G327) expressed in Escherichia coli using biotin-labeled BIM peptide as substrate incubated for 120 to 180 mins by TR-FRET assay B 5 pIC50 >10000 nM IC50 Bioorg Med Chem Lett (2019) 29: 126682-126682 [PMID:31606346]
ChEMBL Binding affinity to MCL1 (unknown origin) by fluorescence polarization assay B 6.3 pIC50 500 nM IC50 Medchemcomm (2016) 7: 778-787

ChEMBL data shown on this page come from version 36:

Zdrazil B, Felix E, Hunter F, Manners EJ, Blackshaw J, Corbett S, de Veij M, Ioannidis H, Lopez DM, Mosquera JF, Magarinos MP, Bosc N, Arcila R, Kizilören T, Gaulton A, Bento AP, Adasme MF, Monecke P, Landrum GA, Leach AR. (2024). The ChEMBL Database in 2023: a drug discovery platform spanning multiple bioactivity data types and time periods. Nucleic Acids Res., 52(D1). DOI: 10.1093/nar/gkad1004. [EPMCID:10767899] [PMID:37933841]
Davies M, Nowotka M, Papadatos G, Dedman N, Gaulton A, Atkinson F, Bellis L, Overington JP. (2015) 'ChEMBL web services: streamlining access to drug discovery data and utilities.' Nucleic Acids Res., 43(W1). DOI: 10.1093/nar/gkv352. [EPMCID:25883136]