bazedoxifene [Ligand Id: 7355] activity data from GtoPdb and ChEMBL

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ChEMBL ligand: CHEMBL46740 (Bazedoxifene, Bazedoxifeno)
  • Estrogen receptor-α/Estrogen receptor alpha in Human [ChEMBL: CHEMBL206] [GtoPdb: 620] [UniProtKB: P03372]
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  • Estrogen receptor-β/Estrogen receptor beta in Human [ChEMBL: CHEMBL242] [GtoPdb: 621] [UniProtKB: Q92731]
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DB Assay description Assay Type Standard value Standard parameter Original value Original units Original parameter Reference
Estrogen receptor-α/Estrogen receptor alpha in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL206] [GtoPdb: 620] [UniProtKB: P03372]
ChEMBL Displacement of Fluormone-tagged ES2 from human recombinant ERalpha after 2 hrs by fluorescence polarization assay B 4.5 pIC50 31710 nM IC50 Bioorg Med Chem (2018) 26: 266-277 [PMID:29198894]
ChEMBL Displacement of fluorochrome-tagged estrogen from human recombinant estrogen receptor-alpha incubated for 2 hr by competitive binding based microplate reader analysis B 6.47 pIC50 339.2 nM IC50 RSC Med Chem (2024) 15: 1329-1347 [PMID:38665833]
ChEMBL Binding Assay: The competition assay was performed in a 96-well plate (polystyrene*) which binds <2.0% of the total input [3H]-17beta-estradiol and each data point was gathered in triplicate. 100 uG/100 uL of the receptor preparation was aliquoted per well. A saturating dose of 2.5 nM [3H]17beta-estradiol+competitor (or buffer) in a 50 uL volume was added in the preliminary competition when 100x and 500x competitor were evaluated, only 0.8 nM [3H]17beta-estradiol was used. The plate was incubated at room temperature for 2.5 h. At the end of this incubation period 150 uL of ice-cold dextran coated charcoal (5% activated charcoal coated with 0.05% 69K dextran) was added to each well and the plate was immediately centrifuged at 99 g for 5 minutes at 4 C. 200 uL of the supernatant solution was then removed for scintillation counting. Samples were counted to 2% or 10 minutes, whichever occurs first. B 7.3 pIC50 50 nM IC50 US-8815934-B2. 2-Phenyl-1-[4-(2-Aminoethoxy)-Benzyl]-Indole and estrogen formulations (2014)
ChEMBL In vitro inhibition of [3H]17-beta-estradiol binding to human estrogen receptor alpha B 7.64 pIC50 23 nM IC50 J Med Chem (2001) 44: 1654-1657 [PMID:11356100]
GtoPdb - - 7.64 pIC50 23 nM IC50 J Med Chem (2001) 44: 1654-7 [PMID:11356100]
ChEMBL In vitro antagonist effect on estrogen receptor alpha transcriptional activation in MCF-7 cells against 10 pM 17-beta-estradiol F 8.43 pIC50 3.7 nM IC50 J Med Chem (2001) 44: 1654-1657 [PMID:11356100]
ChEMBL Inhibition of binding to recombinant human ERalpha by scintillation proximity assay B 9.22 pIC50 0.6 nM IC50 Bioorg Med Chem Lett (2005) 15: 5124-5128 [PMID:16203138]
Estrogen receptor-β/Estrogen receptor beta in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL242] [GtoPdb: 621] [UniProtKB: Q92731]
GtoPdb - - 7.07 pIC50 85 nM IC50 J Med Chem (2001) 44: 1654-7 [PMID:11356100]
ChEMBL In vitro inhibitory concentration against [3H]17-beta-estradiol binding to human estrogen receptor 2 B 7.07 pIC50 85 nM IC50 J Med Chem (2001) 44: 1654-1657 [PMID:11356100]
ChEMBL Inhibition of binding to recombinant human ERbeta by scintillation proximity assay B 8.42 pIC50 3.8 nM IC50 Bioorg Med Chem Lett (2005) 15: 5124-5128 [PMID:16203138]

ChEMBL data shown on this page come from version 34:

Zdrazil B, Felix E, Hunter F, Manners EJ, Blackshaw J, Corbett S, de Veij M, Ioannidis H, Lopez DM, Mosquera JF, Magarinos MP, Bosc N, Arcila R, Kizilören T, Gaulton A, Bento AP, Adasme MF, Monecke P, Landrum GA, Leach AR. (2024). The ChEMBL Database in 2023: a drug discovery platform spanning multiple bioactivity data types and time periods. Nucleic Acids Res., 52(D1). DOI: 10.1093/nar/gkad1004. [EPMCID:10767899] [PMID:37933841]
Davies M, Nowotka M, Papadatos G, Dedman N, Gaulton A, Atkinson F, Bellis L, Overington JP. (2015) 'ChEMBL web services: streamlining access to drug discovery data and utilities.' Nucleic Acids Res., 43(W1). DOI: 10.1093/nar/gkv352. [EPMCID:25883136]