PF-06648671 [Ligand Id: 13411] activity data from GtoPdb and ChEMBL

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ChEMBL ligand: CHEMBL3951810
  • beta-secretase 1/Beta-secretase 1 in Human [ChEMBL: CHEMBL4822] [GtoPdb: 2330] [UniProtKB: P56817]
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DB Assay description Assay Type Standard value Standard parameter Original value Original units Original parameter Reference
beta-secretase 1/Beta-secretase 1 in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL4822] [GtoPdb: 2330] [UniProtKB: P56817]
ChEMBL Inhibition of BACE1 (unknown origin) B 4.7 pIC50 20000 nM IC50 Eur J Med Chem (2022) 232: 114169-114169 [PMID:35176561]
cathepsin D/Cathepsin D in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL2581] [GtoPdb: 2345] [UniProtKB: P07339]
ChEMBL Inhibition of Cathepsin D (unknown origin) B 4.7 pIC50 20000 nM IC50 Eur J Med Chem (2022) 232: 114169-114169 [PMID:35176561]
presenilin 1/presenilin 2/Gamma-secretase in Human (target type: PROTEIN COMPLEX) [ChEMBL: CHEMBL2094135] [GtoPdb: 2402, 2403] [UniProtKB: P49768, P49810, Q8WW43, Q92542, Q96BI3, Q9NZ42]
GtoPdb Measuring reduction of Aβ42 generation in a whole-cell assay using CHO APPwt cells. - 8.01 pIC50 9.8 nM IC50 J Med Chem (2024) 67: 10248-10262 [PMID:38848667]
ChEMBL Inhibition of gamma-secretase (unknown origin) B 8.1 pIC50 8 nM IC50 Eur J Med Chem (2018) 148: 436-452 [PMID:29477076]
ChEMBL Inhibition of gamma secretase derived from human Hela cell membrane assessed as reduction in amyloid beta (1 to 40) production by ELISA B 8.21 pIC50 6.2 nM IC50 Eur J Med Chem (2022) 232: 114169-114169 [PMID:35176561]
ChEMBL Modulation of gamma-secretase in CHO cells expressing human APP assessed as reduction in amyloid beta (1 to 42 residues) production after 24 hrs by ELISA B 8.1 pEC50 8 nM EC50 J Med Chem (2016) 59: 7389-7409 [PMID:27007185]
presenilin 1/Presenilin 1 in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL2473] [GtoPdb: 2402] [UniProtKB: P49768]
GtoPdb Measuring reduction of Aβ42 generation in a whole-cell assay using CHO APPwt cells. - 8.01 pIC50 9.8 nM IC50 J Med Chem (2024) 67: 10248-10262 [PMID:38848667]
ChEMBL Cell-Based Assay: The ability of compounds to modulate production of amyloid beta protein Abeta(1-42) was determined using human WT-APP overexpressing CHO cells. Cells were plated at 22,000 cells/100 uL well in 96 well tissue culture treated, clear plates (Falcon) in DMEM/F12 based medium and incubated for 24 hours at 37° C. Compounds for testing were diluted in 100% DMSO to achieve an eleven points, half log, dose response for IC50 determinations. Compounds were added in fresh medium to achieve 1% final DMSO. Appropriate vehicle or inhibitor controls were added into control wells individually to obtain minimum or maximum inhibition values, respectively, for the assay signal window before the plates were incubated for 24 hours at 37° C. This procedure produces conditioned media in each well which is tested for Abeta(1-42) levels in the ELISA detection step described next. The remaining cell cultures in each well are also tested for cell toxicity as described below. B 8.11 pIC50 7.84 nM IC50 US-9193726-B2. Substituted pyrido[1,2-a]pyrazines for the treatment of neurodegenerative and neurological disorders (2015)

ChEMBL data shown on this page come from version 34:

Zdrazil B, Felix E, Hunter F, Manners EJ, Blackshaw J, Corbett S, de Veij M, Ioannidis H, Lopez DM, Mosquera JF, Magarinos MP, Bosc N, Arcila R, Kizilören T, Gaulton A, Bento AP, Adasme MF, Monecke P, Landrum GA, Leach AR. (2024). The ChEMBL Database in 2023: a drug discovery platform spanning multiple bioactivity data types and time periods. Nucleic Acids Res., 52(D1). DOI: 10.1093/nar/gkad1004. [EPMCID:10767899] [PMID:37933841]
Davies M, Nowotka M, Papadatos G, Dedman N, Gaulton A, Atkinson F, Bellis L, Overington JP. (2015) 'ChEMBL web services: streamlining access to drug discovery data and utilities.' Nucleic Acids Res., 43(W1). DOI: 10.1093/nar/gkv352. [EPMCID:25883136]