dequalinium   Click here for help

GtoPdb Ligand ID: 2313

PDB Ligand
Compound class: Synthetic organic
Comment: While the INN-assigned preparation of dequalinium is in complex with chloride, the compound is also available experimentally as the 'parent' salt form. Two of the references listed here [1,4] refer to the parent compound, while [5] and [6] refer to dequalinium chloride. We show the structure of the parent compound, and our external links are also to this structure.
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Ligand Activity Visualisation Charts

These are box plot that provide a unique visualisation, summarising all the activity data for a ligand taken from ChEMBL and GtoPdb across multiple targets and species. Click on a plot to see the median, interquartile range, low and high data points. A value of zero indicates that no data are available. A separate chart is created for each target, and where possible the algorithm tries to merge ChEMBL and GtoPdb targets by matching them on name and UniProt accession, for each available species. However, please note that inconsistency in naming of targets may lead to data for the same target being reported across multiple charts.

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View interactive charts of activity data across species
2D Structure
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2D Structure

An image of the ligand's 2D structure. For small molecules with SMILES these are drawn using the NCI/CADD Chemical Identifier Resolver. Click on the image to access the chemical structure search tool with the ligand pre-loaded in the structure editor. For other types of ligands, e.g. longer nucleotides and peptides, a manually drawn representation of the molecule may be provided.

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Physico-chemical Properties
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Physico-chemical Properties

Calculated molecular properties are available for small molecules and natural products (not peptides). Properties were generated using the CDK toolkit. All properties were selected to enable the prediction of the Lipinski Rule-of-Five profile or ‘druglikeness’ for each ligand. For more info on each category see the help pages.

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Hydrogen bond acceptors 2
Hydrogen bond donors 2
Rotatable bonds 11
Topological polar surface area 59.8
Molecular weight 456.33
XLogP 9.69
No. Lipinski's rules broken 2
SMILES / InChI / InChIKey
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SMILES / InChI / InChIKey

SMILES (Simplified Molecular Input Line Entry Specification) A specification for unambiguously describing the structure of chemical molecules using short ASCII strings. Canonical SMILES specify a unique representation of the 2D structure without chiral or isotopic specifications. Isomeric SMILES include chiral specification and isotopes.

Standard InChI (IUPAC International Chemical Identifier) and InChIKey InChI is a non-proprietary, standard, textual identifier for chemical substances designed to facilitate linking of information and database searching. An InChIKey is a simplified version of a full InChI, designed for easier web searching.

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Canonical SMILES Nc1cc(C)[n+](c2c1cccc2)CCCCCCCCCC[n+]1c(C)cc(c2c1cccc2)N
Isomeric SMILES Nc1cc(C)[n+](c2c1cccc2)CCCCCCCCCC[n+]1c(C)cc(c2c1cccc2)N
InChI InChI=1S/C30H38N4/c1-23-21-27(31)25-15-9-11-17-29(25)33(23)19-13-7-5-3-4-6-8-14-20-34-24(2)22-28(32)26-16-10-12-18-30(26)34/h9-12,15-18,21-22,31-32H,3-8,13-14,19-20H2,1-2H3/p+2
InChI Key PCSWXVJAIHCTMO-UHFFFAOYSA-P
Classification Click here for help
Compound class Synthetic organic
IUPAC Name Click here for help
1-[10-(4-amino-2-methylquinolin-1-ium-1-yl)decyl]-2-methylquinolin-1-ium-4-amine
International Nonproprietary Names Click here for help
INN number INN
746 dequalinium chloride
Database Links Click here for help
BindingDB Ligand 50048403
CAS Registry No. 6707-58-0 (source: Scifinder)
ChEBI CHEBI:41872
ChEMBL Ligand CHEMBL333826
DrugBank Ligand DB04209
DrugCentral Ligand 4376
GtoPdb PubChem SID 135650170
PubChem CID 2993
RCSB PDB Ligand DEQ
Search Google for chemical match using the InChIKey PCSWXVJAIHCTMO-UHFFFAOYSA-P
Search Google for chemicals with the same backbone PCSWXVJAIHCTMO
Search PubMed clinical trials dequalinium chloride
Search PubMed titles dequalinium chloride
Search PubMed titles/abstracts dequalinium chloride
UniChem Compound Search for chemical match using the InChIKey PCSWXVJAIHCTMO-UHFFFAOYSA-P
UniChem Connectivity Search for chemical match using the InChIKey PCSWXVJAIHCTMO-UHFFFAOYSA-P
Wikipedia Dequalinium